Chi này hiện hành ghi nhận các loài sau:[1]

• Heteroconger balteatus Castle & J. E. Randall, 1999
• Heteroconger camelopardalis (Lubbock, 1980)
• Heteroconger canabus (G. I. McT. Cowan & Rosenblatt, 1974) (white-ring garden eel)
• Heteroconger chapmani (Herre, 1923)
• Heteroconger cobra J. E. Böhlke & J. E. Randall, 1981 (cobra garden eel)
• Heteroconger congroides (D'Ancona, 1928)
• Heteroconger digueti (Pellegrin, 1923) (pale green eel)
• Heteroconger enigmaticus Castle & J. E. Randall], 1999
• Heteroconger hassi (Klausewitz & Eibl-Eibesfeldt, 1959) (spotted garden eel)
• Heteroconger klausewitzi (Eibl-Eibesfeldt & Köster, 1983) (Galapagos garden eel)
• Heteroconger lentiginosus J. E. Böhlke & J. E. Randall, 1981 (masked garden eel)
• Heteroconger longissimus Günther, 1870 (brown garden eel)
• Heteroconger luteolus D. G. Smith, 1989 (yellow garden eel)
• Heteroconger mercyae G. R. Allen & Erdmann, 2009
• Heteroconger obscurus (Klausewitz & Eibl-Eibesfeldt, 1959)
• Heteroconger pellegrini Castle, 1999 (speckled garden eel)
• Heteroconger perissodon J. E. Böhlke & J. E. Randall, 1981
• Heteroconger polyzona Bleeker, 1868
• Heteroconger taylori Castle & J. E. Randall, 1995
• Heteroconger tomberua Castle & J. E. Randall, 1999
• Heteroconger tricia Castle & J. E. Randall, 1999